PCGF6

PCGF6
Identifiers
Aliases	PCGF6, MBLR, RNF134, polycomb group ring finger 6
External IDs	OMIM: 607816; MGI: 1918291; HomoloGene: 12378; GeneCards: PCGF6; OMA:PCGF6 - orthologs
Available structures
PDB	Ortholog search: PDBe RCSB
List of PDB id codes
	2DJB
Gene location (Human)
Chr.	Chromosome 10 (human)
End	103,351,144 bp
Gene location (Mouse)
Chr.	Chromosome 19 (mouse)
End	47,039,345 bp
RNA expression pattern
	Top expressed in
	gonad; ; ventricular zone; ; gastrocnemius muscle; ; testicle; ; skeletal muscle tissue; ; stromal cell of endometrium; ; smooth muscle tissue; ; ganglionic eminence; ; tibial arteries; ; muscle layer of sigmoid colon;
	Top expressed in
	zygote; ; spermatocyte; ; primary oocyte; ; secondary oocyte; ; epiblast; ; seminiferous tubule; ; primitive streak; ; Rostral migratory stream; ; embryo; ; tail of embryo;
	More reference expression data
	n/a
Gene ontology
Molecular function	DNA-binding transcription factor activity; DNA binding; RNA polymerase II transcription regulatory region sequence-specific DNA binding; protein binding; DNA-binding transcription repressor activity, RNA polymerase II-specific; metal ion binding;
Cellular component	nucleus; PcG protein complex; nucleoplasm; PRC1 complex;
Biological process	regulation of transcription, DNA-templated; negative regulation of transcription by RNA polymerase II; transcription, DNA-templated; histone H2A-K119 monoubiquitination; negative regulation of G0 to G1 transition; negative regulation of transcription, DNA-templated; inactivation of X chromosome by genetic imprinting;
	Sources:Amigo / QuickGO
Orthologs
	84108
	71041
	ENSG00000156374
	ENSMUSG00000025050
	Q9BYE7
	Q99NA9
	NM_001011663; NM_032154
	NM_027654; NM_001360632
	NP_001011663; NP_115530
	NP_081930; NP_001347561
	Wikidata
View/Edit Human	View/Edit Mouse

Polycomb group RING finger protein 6 is a protein that in humans is encoded by the PCGF6 gene.^[5]^[6]

The protein encoded by this gene contains a RING finger motif, which is most closely related to those of polycomb group (PcG) proteins RNF110/MEL-18 and BMI1. PcG proteins are known to form protein complexes and function as transcription repressors. This protein has been shown to interact with some PcG proteins and act as a transcription repressor. The activity of this protein is found to be regulated by cell cycle dependent phosphorylation. Alternatively spliced transcript variants encoding different isoforms have been identified.^[6]

References

1 2 3 GRCh38: Ensembl release 89: ENSG00000156374 – Ensembl, May 2017
1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000025050 – Ensembl, May 2017
↑ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ Akasaka T, Takahashi N, Suzuki M, Koseki H, Bodmer R, Koga H (Aug 2002). "MBLR, a new RING finger protein resembling mammalian Polycomb gene products, is regulated by cell cycle-dependent phosphorylation" (PDF). Genes Cells. 7 (8): 835–50. doi:10.1046/j.1365-2443.2002.00565.x. hdl:2027.42/72663. PMID 12167161. S2CID 23060582.
1 2 "Entrez Gene: PCGF6 polycomb group ring finger 6".

Kanno M, Hasegawa M, Ishida A, et al. (1996). "mel-18, a Polycomb group-related mammalian gene, encodes a transcriptional negative regulator with tumor suppressive activity". EMBO J. 14 (22): 5672–8. doi:10.1002/j.1460-2075.1995.tb00254.x. PMC 394682. PMID 8521824.
Trimarchi JM, Fairchild B, Wen J, Lees JA (2001). "The E2F6 transcription factor is a component of the mammalian Bmi1-containing polycomb complex". Proc. Natl. Acad. Sci. U.S.A. 98 (4): 1519–24. doi:10.1073/pnas.041597698. PMC 29289. PMID 11171983.
Suzuki M, Mizutani-Koseki Y, Fujimura Y, et al. (2002). "Involvement of the Polycomb-group gene Ring1B in the specification of the anterior-posterior axis in mice". Development. 129 (18): 4171–83. doi:10.1242/dev.129.18.4171. PMID 12183370.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
Deloukas P, Earthrowl ME, Grafham DV, et al. (2004). "The DNA sequence and comparative analysis of human chromosome 10". Nature. 429 (6990): 375–81. Bibcode:2004Natur.429..375D. doi:10.1038/nature02462. PMID 15164054.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID 16189514. S2CID 4427026.
Zhong N, Radu G, Ju W, Brown WT (2006). "Novel progerin-interactive partner proteins hnRNP E1, EGF, Mel 18, and UBC9 interact with lamin A/C". Biochem. Biophys. Res. Commun. 338 (2): 855–61. doi:10.1016/j.bbrc.2005.10.020. PMID 16248985.
Lee MG, Norman J, Shilatifard A, Shiekhattar R (2007). "Physical and functional association of a trimethyl H3K4 demethylase and Ring6a/MBLR, a polycomb-like protein". Cell. 128 (5): 877–87. doi:10.1016/j.cell.2007.02.004. PMID 17320162. S2CID 6519228.

This article on a gene on human chromosome 10 is a stub. You can help Wikipedia by adding missing information.

[refGRCh38Ensembl-1] 1 2 3 GRCh38: Ensembl release 89: ENSG00000156374 – Ensembl, May 2017

[refGRCm38Ensembl-2] 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000025050 – Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[pmid12167161-5] Akasaka T, Takahashi N, Suzuki M, Koseki H, Bodmer R, Koga H (Aug 2002). "MBLR, a new RING finger protein resembling mammalian Polycomb gene products, is regulated by cell cycle-dependent phosphorylation" (PDF). Genes Cells. 7 (8): 835–50. doi:10.1046/j.1365-2443.2002.00565.x. hdl:2027.42/72663. PMID 12167161. S2CID 23060582.

[entrez-6] 1 2 "Entrez Gene: PCGF6 polycomb group ring finger 6".

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PCGF6

References

Further reading