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Geomicrobium

From Wikipedia, the free encyclopedia

Geomicrobium
Scientific classification Edit this classification
Domain: Bacteria
Kingdom: Bacillati
Phylum: Bacillota
Class: Bacilli
Order: Bacillales
Family: Marinococcaceae
Genus: Geomicrobium
Echigo et al. 2010[1]
Type species
Geomicrobium halophilum
Echigo et al. 2010
Species
  • G. halophilum
  • G. sediminis
Synonyms
  • Geomicrobiium[2]

Geomicrobium is a moderately halophilic and alkaliphilic genus of bacteria from the family of Bacillaceae with one known species (Geomicrobium halophilum).[1][2][3] Geomicrobium halophilum has been isolated from garden soil in Japan.[3]

Phylogeny

[edit]

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[4]

16S rRNA based LTP_10_2024[5][6][7] 120 marker proteins based GTDB 09-RS220[8][9][10]

Geomicrobium sediminis Xiong et al. 2014

Geomicrobium halophilum Echigo et al. 2010

other

Geomicrobium sediminis

Geomicrobium halophilum

other

See also

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References

[edit]
  1. 1 2 3 A.C. Parte; et al. "Geomicrobium". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2025-02-28.
  2. 1 2 "Geomicrobium". UniProt.
  3. 1 2 Echigo, Akinobu; Minegishi, Hiroaki; Mizuki, Toru; Kamekura, Masahiro; Usami, Ron (1 April 2010). "Geomicrobium halophilum gen. nov., sp. nov., a moderately halophilic and alkaliphilic bacterium isolated from soil". International Journal of Systematic and Evolutionary Microbiology. 60 (4): 990–995. doi:10.1099/ijs.0.013268-0. PMID 19666816.
  4. C.L. Schoch; et al. "Geomicrobium". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2025-02-28.
  5. "The LTP". Retrieved 10 December 2024.
  6. "LTP_all tree in newick format". Retrieved 10 December 2024.
  7. "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
  8. "GTDB release 09-RS220". Genome Taxonomy Database. Retrieved 10 May 2024.
  9. "bac120_r220.sp_labels". Genome Taxonomy Database. Retrieved 10 May 2024.
  10. "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2024.