Caldimicrobium
| Caldimicrobium | |
|---|---|
 | |
| Caldimicrobium rimae | |
Scientific classification  | |
| Domain: | Bacteria |
| Kingdom: | Pseudomonadati |
| Phylum: | Thermodesulfobacteriota |
| Class: | Thermodesulfobacteria |
| Order: | Thermodesulfobacteriales |
| Family: | Thermodesulfobacteriaceae |
| Genus: | Caldimicrobium Miroshnichenko et al. 2009[1] |
| Type species | |
| Caldimicrobium rimae Miroshnichenko et al. 2009 | |
| Species[2] | |
| Synonyms[3] | |
| |
Caldimicrobium is a genus of bacteria from the family Thermodesulfobacteriaceae.[1][3][4][5][6]
Caldimicrobium is an anaerobic thermophile which is roughly 1.0–1.2 micrometers long and 0.5 micrometers wide.[7]
Phylogeny
[edit]The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI).[2]
| 16S rRNA based LTP_10_2024[8][9][10] | 120 marker proteins based GTDB 10-RS226[11][12][13] | ||||||||||||||||||||||||
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References
[edit]- 1 2 3 Caldimicrobium in LPSN; Freese, H. M.; Meier-Kolthoff, J. P.; Sardà Carbasse, J.; Afolayan, A. O.; Göker, M. (29 October 2025). "TYGS and LPSN in 2025: a Global Core Biodata Resource for genome-based classification and nomenclature of prokaryotes within DSMZ Digital Diversity". Nucleic Acids Research. 53: D1–D12. doi:10.1093/nar/gkaf1110.
- 1 2 Schoch CL; et al. "Caldimicrobium". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2025-06-05.
- 1 2 "Caldimicrobium". www.uniprot.org.
- ↑ Anitori, Roberto Paul (2012). Extremophiles: Microbiology and Biotechnology. Horizon Scientific Press. ISBN 9781904455981.
- ↑ Falkiewicz-Dulik, Michalina; Janda, Katarzyna; Wypych, George (2015). Handbook of Material Biodegradation, Biodeterioration, and Biostablization. Elsevier. ISBN 9781927885024.
- ↑ Parker, Charles Thomas; Taylor, Dorothea; Garrity, George M (2009). Parker, Charles Thomas; Garrity, George M (eds.). "Nomenclature Abstract for Caldimicrobium Miroshnichenko et al. 2009 emend. Kojima et al. 2016". The NamesforLife Abstracts. doi:10.1601/nm.14321.
- ↑ Miroshnichenko, M. L.; Lebedinsky, A. V.; Chernyh, N. A.; Tourova, T. P.; Kolganova, T. V.; Spring, S.; Bonch-Osmolovskaya, E. A. (May 1, 2009). "Caldimicrobium rimae gen. nov., sp. nov., an extremely thermophilic, facultatively lithoautotrophic, anaerobic bacterium from the Uzon Caldera, Kamchatka". International Journal of Systematic and Evolutionary Microbiology. 59 (5): 1040–1044. doi:10.1099/ijs.0.006072-0. PMID 19406789.
- ↑ "The LTP". Retrieved 10 December 2024.
- ↑ "LTP_all tree in newick format". Retrieved 10 December 2024.
- ↑ "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
- ↑ "GTDB release 10-RS226". Genome Taxonomy Database. Retrieved 1 May 2025.
- ↑ "bac120_r226.sp_label". Genome Taxonomy Database. Retrieved 1 May 2025.
- ↑ "Taxon History". Genome Taxonomy Database. Retrieved 1 May 2025.
Further reading
[edit]- Miroshnichenko, ML; Lebedinsky, AV; Chernyh, NA; Tourova, TP; Kolganova, TV; Spring, S; Bonch-Osmolovskaya, EA (May 2009). "Caldimicrobium rimae gen. nov., sp. nov., an extremely thermophilic, facultatively lithoautotrophic, anaerobic bacterium from the Uzon Caldera, Kamchatka". International Journal of Systematic and Evolutionary Microbiology. 59 (Pt 5): 1040–4. doi:10.1099/ijs.0.006072-0. PMID 19406789.
- Kojima, H; Umezawa, K; Fukui, M (April 2016). "Caldimicrobium thiodismutans sp. nov., a sulfur-disproportionating bacterium isolated from a hot spring, and emended description of the genus Caldimicrobium". International Journal of Systematic and Evolutionary Microbiology. 66 (4): 1828–31. doi:10.1099/ijsem.0.000947. hdl:2115/64925. PMID 26842785.
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