Homeobox protein cut-like 1
Homeobox protein cut-like 1 is a protein that in humans is encoded by the CUX1 gene (previously CUTL1). This protein is a homeodomain protein.[3][4][5][6]
The term "cut" in the name "cut-like 1" derives from the "cut wing" phenotype observed in a mutant of Drosophila melanogaster.[7] In mammals, a CCAAT-displacement activity was originally described in DNA binding assays.[8] The human gene was identified following purification of the CCAAT-displacement protein (CDP) and has been successively been called CDP, Cut-like 1 (CUTL1), CDP/Cut and finally, CUX1.[9] (Consequently, a literature search for CUX1 fails to bring up many of the earlier studies). Cut homeobox genes are present in all metazoans. In mammals, CUX1 is expressed ubiquitously in all tissues. A second gene, called CUX2, is expressed primarily in neuronal cells.[10]
Gene
[edit]The human CUX1 gene is large, encompassing more than 440,000 base pairs with two alternative first exons and an additional 23 exons.[11][12] The last exon has a weak polyadenylation site allowing RNA polymerase II often to continue transcribing until it reaches an additional 10 exons. Splicing of this longer transcript from exon 14 to exon 25 generates a mature mRNA that codes for a protein that was called CASP (Cut alternatively spliced product).[13] CASP localizes to the Golgi and does not seem to impact at all on CUX1 function.[14] However, because of the complex structure of the gene, most oligos in microarrays were derived from the most 3' exons that are unique to CASP. Thus, until the advent of RNA sequencing CUX1 expression data has been essentially limited to immunohistochemical analyses. Similarly, many guide RNAs in CRISPR-Cas screening studies target the CASP-specific exons and do not affect CUX1.
Structure
[edit]The use of two transcription start sites, alternative splicing of some exons and proteolytic processing combine to generate several CUX1 protein isoforms[9][15][16][17][18][19][20] (reviewed[21]) The full-length protein, often referred to as p200 CUX1, contains five evolutionarily conserved domains: a coiled-coil (CC), three Cut domains (C1, C2 and C3), originally called Cut repeats (CRs), and a Cut homeodomain (HD).[9][22] The coiled-coil's function remains to be defined. The three Cut domains and the Cut homeodomain were originally characterized as DNA binding domains,[23][24][25][26] and were later found to be involved also in protein-protein interactions.[27][28][29][30] In addition to these conserved domains, the n-terminal 100 amino acids contains an autoinhibitory domain, while the carboxy-terminal region downstream of the homeodomain was shown to function as an active repression domain.[31][32] In mid to late G1, the full-length protein is proteolytically processed to generate a shorter isoform, p110 CUX1 that lacks approximately the n-terminal 747 amino acids and thus contains only 3 DNA binding domains: CUT domains 2 and 3 and the Cut homeodomain (C2C3HD).
DNA binding assays with histidine-tagged fusion proteins showed that one Cut domain is not sufficient for DNA binding, while several combination of domains were found to bind to DNA with distinct affinities and kinetics: CR1CR2, CR3HD and CR2CR3HD.[33] The C1C2 protein displayed very rapid "on" and "off" DNA binding rates, whereas any combination of a Cut domain with the Cut homeodomain exhibited slower binding kinetics.[33] Interestingly, the full-length CUX1 protein purified from insect cells exhibited DNA binding kinetics similar to that of CR1CR2, suggesting that the Cut homeodomain may not be active in the context of the full-length protein.[33]
Function
[edit]The protein encoded by this gene is a member of the homeodomain family of DNA binding proteins. It regulates gene expression, morphogenesis, and differentiation and it also plays a role in cell cycle progression, particularly at S-phase. Several alternatively spliced transcript variants of this gene have been described, but the full-length nature of some of these variants has not been determined, and the p200 isoform of Cux1 is processed proteolytically to smaller active isoforms, such as p110.[6] Cux1 DNA binding is stimulated by activation of the PAR2/F2RL1 cell-surface G-protein-coupled receptor in fibroblasts and breast-cancer epithelial cells to regulate Matrix metalloproteinase 10, Interleukin1-alpha, and Cyclo-oxygenase 2 (COX2) genes.[34]
Multiple reviews have detailed the tissue-specific functions and genetic interactions in Drosophila and the early characterization of the CDP in mammalian cells,[35] expression and activity of CUX1 in the myeloid cell lineage,[36] multiple CUX1 isoforms, modes of DNA binding, early mouse models and cell-based assays,[21][37] roles of CUX1 in kidney development and homeostasis,[38] mechanisms by which CUX1 stimulates cell migration and invasion,[39] roles of CUX1 and CUX2 in neurons of the cortex upper layer[40][41] and the paradoxical implications of CUX1 in cancer.[42] In addition, a number of commentaries present more specific views and speculations.[43][44][45][46]
Biochemical activities
[edit]p200 CUX1 is a very abundant protein that binds to DNA with extremely fast kinetics (rapid "on" and "off" rates).[33] This is not consistent with a role as a classical transcription factor that binds stably to DNA and recruits a co-activator or a co-repressor, however, the p200 CUX1 protein may still be able to repress transcription by competition for binding site occupancy.[31] Indeed, CUX1 was originally purified as the CCAAT-displacement protein (CDP).[9][47] In addition to this potential role in transcriptional repression, recent studies revealed that p200 CUX1 functions as an auxiliary factor in base excision repair. In vitro, CUT domains of CUX1 stimulate the enzymatic activities of the 8-oxoguanine DNA glycosylase (OGG1) and the apurinic/apyrimidinic endonuclease 1 (APE1).[29][30][48][49] In agreement with results from in vitro DNA repair assays, a p200 CUX1-GFP fusion protein is rapidly recruited to DNA damage generated by laser microirradiation,[49] while CUX1 knockdown in human cells causes a delay in the repair of oxidative DNA damage and mono-alkylated bases in genomic DNA, and sensitizes cancer cells to treatments with H2O2,[29][48] ionizing radiation[49] and the mono-alkylating agent temozolomide.[30] Conversely, p200 CUX1 overexpression increases the resistance of cancer cells to the same treatments.[29][30][48][49] Structure/function analysis established that a fusion protein containing Cut domains 1 and 2 linked to a nuclear localization signal (C1C2-NLS) is rapidly recruited to DNA damage and is sufficient to accelerate the repair oxidative DNA damage and mono-alkylated bases in genomic DNA.[30][49] Since the C1C2-NLS protein is devoid of transcription activation potential,[29][49] these results suggest that Cut domains are directly involved in DNA repair.
Transcriptional activities
[edit]The shorter p110 CUX1 isoform stably interacts with DNA and can function as transcriptional repressor or activator depending on promoter context.[50][51] Transcription and cell-based assays demonstrated a role for p110 CUX1 in stimulating cell cycle progression and cell proliferation,[17][52] strengthening of the spindle assembly checkpoint,[53] ensuring an efficient DNA damage response,[54] promoting cell migration and invasion,[51][55] and increasing resistance to apoptotic signals.[56] Of note, the p200 CUX1 protein was inactive in all these transcriptional and cell-based assays.
p110 CUX1 has been demonstrated to bind the protective allele of FTO single nucleotide polymorphisms (SNPs) rs8050136 or rs1421085 highly associated with human obesity, and promote the expression of RPGRIP1L.[57][58][59] RPGRIP1L hypomorphism in mice results in obesity,[60][61] suggesting an important role of CUX1 in body weight regulation.
Clinical significance
[edit]Role in tumor growth
[edit]Genetic data from over 7,600 cancer patients shows that over 1% has the deactivated CUX1 which links to progression of tumor growth. Researchers from the Wellcome Trust Sanger Institute reported that the mutation of CUX1 reduces the inhibitory effects of a biological inhibitor, PIK3IP1 (phosphoinositide-3-kinase interacting protein 1), resulted in higher activity of the growth promoting enzyme, phosphoinositide 3-kinase (PI3K) which leads to tumor progression. Although CUX1 is mutated at a lower rate compared to other known gene mutations that cause cancer, this deactivated gene is found across many cancer types in this study to be the underlying cause of the disease.[62][63]
Overexpression in cancers
[edit]CUX1 is overexpressed in many cancers.[64] The comprehensive molecular characterization of human colon and rectal cancer performed by The Cancer Genome Atlas (TCGA) ranked CUX1 as the fifth gene on a scale showing a correlation between tumour aggressiveness and gene expression/somatic copy number alterations.[65] TCGA and REMBRANDT data also show shorter survival of glioblastoma patients with high CUX1 mRNA expression[66] (reviewed[30]). In smaller scale studies, immunohistochemical analyses on breast, pancreas and glioblastoma cancers reveal that CUX1 expression inversely correlates with relapse-free and overall survival.[30][55][56][67] An alternative CUX1 transcript that is initiated within intron 20 and codes for a p75 isoform is expressed specifically in the testis and thymus.[15][18] This transcript was found to be aberrantly expressed in many breast tumour cells lines and breast tumours.[15] Transgenic mice expressing this transcript in mammary epithelial cells were shown to develop mammary tumours with metastasis to the lung.[68]
Tumors in CUX1 transgenic mice
[edit]CUX1 transgenic mice develop tumors in multiple organs and tissues after a long latency period.[48][53][68][69][70][71] Transgenic mice expressing either p75, p110 or p200 CUX1 in mammary epithelial cells develop mammary tumours with a low penetrance (~20%) and with a long latency period.[48][68] Metastasis to the lung was observed in three cases of mammary tumors expressing p75 CUX1.[68]
The mechanisms of action differ widely between p110 CUX1 and p200 CUX1. Transgenic mice expressing p110 CUX1 in mammary epithelial cells develop mammary tumors that exhibit a sub-tetraploid chromosome number, suggesting passage through tetraploidy resulting from cytokinesis failure.[53][68] Cells do not usually survive as tetraploid with multiple centrosomes. Overexpression of p110 CUX1 was shown to activate a transcriptional program that reinforces the spindle assembly checkpoint and delays mitosis until extranumerary centrosomes have clustered to two poles, thereby enabling bipolar mitosis and survival of tetraploid cells. Yet, passage through a multipolar intermediate enriches for merotelic chromosome attachments, leading to chromosome mis-segregation and the rapid generation of aneuploid populations from which tumorigenic cells emerge.[53]
Tumors that develop in p200 CUX1 transgenic mice reveal a different mode of action, as 44% of these tumors harboured a spontaneous mutation activating the Kras gene.[48] The cooperation between RAS and p200 CUX1 was confirmed by lentiviral infections in the lung.[48] RAS oncogenes do not transform primary cells, but instead cause cellular senescence. This results from the elevated production of reactive oxygen species (ROS) that lead to oxidative DNA damage. Biochemical and cell-based assays demonstrated that the CUT domains within CUX1 and other Cut domain proteins stimulate the enzymatic activities of some enzymes of the base excision repair pathway and accelerate the repair of oxidative DNA damage.[29][30][48][49][72][73] Hence, human and primary rodent fibroblasts that are transfected with KRAS and CUX1 exhibit similar ROS levels as cells that receive only KRAS but show much reduced DNA damage.[48] In agreement with these findings, CUX1 knockdown is synthetic lethal in all cancer cells exhibiting high levels of ROS as a consequence of activating mutations in either KRAS, HRAS, BRAF or EGFR.[48][49]
Tumor suppressor
[edit]Loss-of-heterozygosity (LOH) of the 7q22.1 chromosomal region, where CUX1 resides, was reported in 8–22% of various cancer,[74][75][76][77] and in close to 50% in therapy-associated leukemias.[78][79] As no inactivating mutations were found in the remaining allele,[80][81][82][83] the notion that CUX1 could be the tumor suppressor gene on 7q22.1 was dismissed for some time. However, refined mapping in leiomyomas and myeloid leukemias eventually pointed to CUX1 as the sole tumor suppressor gene in this region.[83][84][85][86][87][88] These genetic data suggest that CUX1 may be a haploinsufficient tumor suppressor gene. In addition to LOH events, large scale DNA sequencing identified inactivating point mutations in 1–5% of cancers where both alleles are present.[89] There is no tumor case where both CUX1 allele are inactivated.
While the biochemical activities of CUX1 that explain its role in tumor maintenance and progression have been well defined, the biochemical functions of CUX1 involved in tumor suppression have yet to be firmly established. Two mechanisms have been proposed. One study reported that CUX1 functions as a transcriptional activator of PIK3IP1, a gene that codes for the phosphoinositide-3-kinase interacting protein 1 (PIK3IP1), a direct inhibitor of the PI3K p110 catalytic subunit.[89][90] CUX1 knockdown caused a decrease in PIK3IP1 expression that was associated with an increase in PI3K signaling and AKT signaling.[89] A separate study, however, argued that CUX1 is itself a target of AKT signaling.[56] Activation of the PI3K–AKT signaling pathway by insulin-like growth factor 1 (IGF1) or by AKT2 overexpression led to the upregulation of CUX1 and was associated with resistance to apoptosis, whereas treatment of cells with the PI3K inhibitor LY294002 decreased CUX1 expression and increased apoptosis.[56] Whether the discrepancies in the results and conclusions from these two studies can be explained by differences in cell-types or other reasons remains to be verified. The auxiliary role of CUX1 in base excision repair has raised the possibility that its tumor suppressor function may be linked to its function in DNA repair. CUX1 knockdown delays DNA repair in multiple cell lines. Mouse embryo fibroblasts (MEFs) derived from a Cux1-/- knockout mouse exhibit increased genomic instability23, moreover Cux1+/−- heterozygous MEFs are haploinsufficient for DNA repair18. Yet, whether CUX1 hemizygosity augments the risk of cancer by increasing the frequency of mutations and/or genomic rearrangements remains to be formally tested.
CASP
[edit]
The CUX1 gene Alternatively Spliced Product was first reported in 1997.[92][a] The CUX1 gene has up to 33 exons. CASP mRNA includes exons 1 through 14 and 25 through 33.[94] The human CASP protein is predicted to contain 678 amino acids, of which 400 are shared with CUTL1.[92] CASP protein is approximately 80 kD.[92] It lacks the DNA binding region of CUTL1,[92][95] but instead contains a trans-membrane domain that allows it to insert into lipid bilayers.[95] It has been localized to the Golgi apparatus.[95]
CASP has been reported to be part of a complex with Golgin 84 that tethers COPI vesicles and is important for retrograde transport in the Golgi and between the Golgi and endoplasmic reticulum.[96] The targeting of vesicles involves tethers and SNAREs.[96]
Interactions
[edit]
Cux1 (CUTL1, CDP, CDP/Cux) has been shown to interact with:
These physical interactions are reported in BioPlex 2.0
Notes
[edit]References
[edit]- 1 2 3 GRCh38: Ensembl release 89: ENSG00000257923 – Ensembl, May 2017
- ↑ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
- ↑ Scherer SW, Neufeld EJ, Lievens PM, Orkin SH, Kim J, Tsui LC (May 1993). "Regional localization of the CCAAT displacement protein gene (CUTL1) to 7q22 by analysis of somatic cell hybrids". Genomics. 15 (3): 695–696. doi:10.1006/geno.1993.1130. PMID 8468066.
- ↑ Glöckner G, Scherer S, Schattevoy R, Boright A, Weber J, Tsui LC, et al. (December 1998). "Large-Scale Sequencing of Two Regions in Human Chromosome 7q22: Analysis of 650 kb of Genomic Sequence around the EPO and CUTL1 Loci Reveals 17 Genes". Genome Research. 8 (10): 1060–1073. doi:10.1101/gr.8.10.1060. PMC 310788. PMID 9799793.
- ↑ Oka T, Ungar D, Hughson FM, Krieger M (April 2004). "The COG and COPI Complexes Interact to Control the Abundance of GEARs, a Subset of Golgi Integral Membrane Proteins". Molecular Biology of the Cell. 15 (5): 2423–2435. doi:10.1091/mbc.E03-09-0699. PMC 404034. PMID 15004235.
- 1 2 "Entrez Gene: CUTL1 cut-like 1, CCAAT displacement protein (Drosophila)".
- ↑ Blanc R (1942). "The production of wing scalloping in Drosophila melanogaster". University of California Publications in Zoology. 49: 1–31.
- ↑ Barberis A, Superti-Furga G, Busslinger M (July 1987). "Mutually exclusive interaction of the CCAAT-binding factor and of a displacement protein with overlapping sequences of a histone gene promoter". Cell. 50 (3): 347–359. doi:10.1016/0092-8674(87)90489-2. PMID 3607873.
- 1 2 3 4 Neufeld EJ, Skalnik DG, Lievens PM, Orkin SH (April 1992). "Human CCAAT displacement protein is homologous to the Drosophila homeoprotein, cut". Nature Genetics. 1 (1): 50–55. doi:10.1038/ng0492-50. PMID 1301999.
- ↑ Quaggin SE, Vandenheuvel GB, Golden K, Bodmer R, Igarashi P (September 1996). "Primary structure, neural-specific expression, and chromosomal localization of Cux-2, a second murine homeobox gene related to Drosophila cut". The Journal of Biological Chemistry. 271 (37): 22624–22634. doi:10.1074/jbc.271.37.22624. PMID 8798433.
- ↑ "UCSC Genome Browser on Human Dec. 2013 (GRCh38/hg38) Assembly". University of California, Santa Cruz.
- ↑ Zeng RW, Soucie E, Sung Moon N, Martin-Soudant N, Bérubé G, Leduy L, et al. (January 2000). "Exon/intron structure and alternative transcripts of the CUTL1 gene". Gene. 241 (1): 75–85. doi:10.1016/s0378-1119(99)00465-5. PMID 10607901.
- ↑ Lievens PM, Tufarelli C, Donady JJ, Stagg A, Neufeld EJ (September 1997). "CASP, a novel, highly conserved alternative-splicing product of the CDP/cut/cux gene, lacks cut-repeat and homeo DNA-binding domains, and interacts with full-length CDP in vitro". Gene. 197 (1–2): 73–81. doi:10.1016/s0378-1119(97)00243-6. PMID 9332351.
- ↑ Gillingham AK, Pfeifer AC, Munro S (November 2002). "CASP, the alternatively spliced product of the gene encoding the CCAAT-displacement protein transcription factor, is a Golgi membrane protein related to giantin". Molecular Biology of the Cell. 13 (11): 3761–3774. doi:10.1091/mbc.e02-06-0349. PMC 133590. PMID 12429822.
- 1 2 3 Goulet B, Watson P, Poirier M, Leduy L, Bérubé G, Meterissian S, et al. (November 2002). "Characterization of a tissue-specific CDP/Cux isoform, p75, activated in breast tumor cells". Cancer Research. 62 (22): 6625–6633. PMID 12438259.
- ↑ Moon NS, Premdas P, Truscott M, Leduy L, Berube G, Nepveu A (September 2001). "S phase-specific proteolytic cleavage is required to activate stable DNA binding by the CDP/Cut homeodomain protein". Molecular and Cellular Biology. 21 (18): 6332–6345. doi:10.1128/MCB.21.18.6332-6345.2001. PMC 87367. PMID 11509674.
- 1 2 Truscott M, Denault JB, Goulet B, Leduy L, Salvesen GS, Nepveu A (October 2007). "Carboxyl-terminal proteolytic processing of CUX1 by a caspase enables transcriptional activation in proliferating cells". The Journal of Biological Chemistry. 282 (41): 30216–30226. doi:10.1074/jbc.M702328200. PMID 17681953.
- 1 2 Vandenheuvel GB, Quaggin SE, Igarashi P (October 1996). "A unique variant of a homeobox gene related to Drosophila cut is expressed in mouse testis". Biology of Reproduction. 55 (4): 731–739. doi:10.1095/biolreprod55.4.731. PMID 8879483.
- ↑ Maitra U, Seo J, Lozano MM, Dudley JP (October 2006). "Differentiation-induced cleavage of Cutl1/CDP generates a novel dominant-negative isoform that regulates mammary gene expression". Molecular and Cellular Biology. 26 (20): 7466–7478. doi:10.1128/MCB.01083-06. PMC 1636867. PMID 17015474.
- ↑ "CUX1 cut like homeobox 1 [ Homo sapiens (human) ]". NCBI.
- 1 2 Sansregret L, Nepveu A (April 2008). "The multiple roles of CUX1: insights from mouse models and cell-based assays". Gene. 412 (1–2): 84–94. doi:10.1016/j.gene.2008.01.017. PMID 18313863.
- ↑ Blochlinger K, Bodmer R, Jack J, Jan LY, Jan YN (June 1988). "Primary structure and expression of a product from cut, a locus involved in specifying sensory organ identity in Drosophila". Nature. 333 (6174): 629–635. doi:10.1038/333629a0. PMID 2897632.
- ↑ Harada R, Dufort D, Denis-Larose C, Nepveu A (January 1994). "Conserved cut repeats in the human cut homeodomain protein function as DNA binding domains". The Journal of Biological Chemistry. 269 (3): 2062–2067. PMID 7904999.
- ↑ Harada R, Berube G, Tamplin OJ, Denis-Larose C, Nepveu A (January 1995). "DNA-binding specificity of the cut repeats from the human cut-like protein". Molecular and Cellular Biology. 15 (1): 129–140. doi:10.1128/MCB.15.1.129. PMC 231920. PMID 7799919.
- ↑ Aufiero B, Neufeld EJ, Orkin SH (August 1994). "Sequence-specific DNA binding of individual cut repeats of the human CCAAT displacement/cut homeodomain protein". Proceedings of the National Academy of Sciences of the United States of America. 91 (16): 7757–7761. doi:10.1073/pnas.91.16.7757. PMC 44481. PMID 7914370.
- ↑ Andres V, Chiara MD, Mahdavi V (January 1994). "A new bipartite DNA-binding domain: cooperative interaction between the cut repeat and homeo domain of the cut homeo proteins". Genes & Development. 8 (2): 245–257. doi:10.1101/gad.8.2.245. PMID 7905452.
- ↑ Santaguida M, Ding Q, Berube G, Truscott M, Whyte P, Nepveu A (2001). "Phosphorylation of the CCAAT displacement protein (CDP)/Cux transcription factor by cyclin A-Cdk1 modulates its DNA binding activity in G(2)". Journal of Biological Chemistry. 276 (49): 45780–45790.
- ↑ Santaguida M, Nepveu A (September 2005). "Differential regulation of CDP/Cux p110 by cyclin A/Cdk2 and cyclin A/Cdk1". The Journal of Biological Chemistry. 280 (38): 32712–32721. doi:10.1074/jbc.M505417200. PMID 16081423.
- 1 2 3 4 5 6 Ramdzan ZM, Pal R, Kaur S, Leduy L, Berube G, Davoudi S, ... and Nepveu A. "The function of CUX1 in oxidative DNA damage repair is needed to prevent premature senescence of mouse embryo fibroblasts. Oncotarget 2015, 6(6):3613–26.
- 1 2 3 4 5 6 7 8 Kaur S, Ramdzan ZM, Guiot MC, Li L, Leduy L, Ramotar D, et al. (March 2018). "CUX1 stimulates APE1 enzymatic activity and increases the resistance of glioblastoma cells to the mono-alkylating agent temozolomide". Neuro-Oncology. 20 (4): 484–493. doi:10.1093/neuonc/nox178. PMC 5909652. PMID 29036362.
- 1 2 Mailly F, Berube G, Harada R, Mao PL, Phillips S, Nepveu A (October 1996). "The human cut homeodomain protein can repress gene expression by two distinct mechanisms: active repression and competition for binding site occupancy". Molecular and Cellular Biology. 16 (10): 5346–5357. doi:10.1128/MCB.16.10.5346. PMC 231533. PMID 8816446.
- ↑ Truscott M, Raynal L, Wang Y, Berube G, Leduy L, Nepveu A (November 2004). "The N-terminal region of the CCAAT displacement protein (CDP)/Cux transcription factor functions as an autoinhibitory domain that modulates DNA binding". The Journal of Biological Chemistry. 279 (48): 49787–49794. doi:10.1074/jbc.M409484200. PMID 15377665.
- 1 2 3 4 Moon NS, Berube G, Nepveu A (2000). "CCAAT displacement activity involves Cut repeats 1 and 2, not the Cut homeodomain". Journal of Biological Chemistry. 275 (40): 31325–31334.
- ↑ Wilson BJ, Harada R, LeDuy L, Hollenberg MD, Nepveu A (January 2009). "CUX1 transcription factor is a downstream effector of the proteinase-activated receptor 2 (PAR2)". The Journal of Biological Chemistry. 284 (1): 36–45. Bibcode:2009JBiCh.284...36W. doi:10.1074/jbc.M803808200. PMID 18952606.
- ↑ Nepveu A (May 2001). "Role of the multifunctional CDP/Cut/Cux homeodomain transcription factor in regulating differentiation, cell growth and development". Gene. 270 (1–2): 1–15. doi:10.1016/s0378-1119(01)00485-1. PMID 11403998.
- ↑ Skalnik DG (February 2002). "Transcriptional mechanisms regulating myeloid-specific genes". Gene. 284 (1–2): 1–21. doi:10.1016/s0378-1119(02)00387-6. PMID 11891042.
- ↑ Hulea L, Nepveu A (April 2012). "CUX1 transcription factors: from biochemical activities and cell-based assays to mouse models and human diseases". Gene. 497 (1): 18–26. doi:10.1016/j.gene.2012.01.039. PMID 22306263.
- ↑ Alcalay NI, Vanden Heuvel GB (June 2009). "Regulation of cell proliferation and differentiation in the kidney". Frontiers in Bioscience. 14 (13): 4978–4991. doi:10.2741/3582. PMC 2749561. PMID 19482600.
- ↑ Kedinger V, Nepveu A (2010). "The roles of CUX1 homeodomain proteins in the establishment of a transcriptional program required for cell migration and invasion". Cell Adhesion & Migration. 4 (3): 348–352. doi:10.4161/cam.4.3.11407. PMC 2958607. PMID 20224295.
- ↑ Cubelos B, Nieto M (November 2010). "Intrinsic programs regulating dendrites and synapses in the upper layer neurons of the cortex". Communicative & Integrative Biology. 3 (6): 483–486. doi:10.4161/cib.3.6.12755. PMC 3038044. PMID 21331220.
- ↑ Weiss LA, Nieto M (February 2019). "The crux of Cux genes in neuronal function and plasticity". Brain Research. 1705: 32–42. doi:10.1016/j.brainres.2018.02.044. PMID 29518378.
- ↑ Ramdzan ZM, Nepveu A (October 2014). "CUX1, a haploinsufficient tumour suppressor gene overexpressed in advanced cancers". Nature Reviews. Cancer. 14 (10): 673–682. doi:10.1038/nrc3805. PMID 25190083.
- ↑ Chapman HA. "Cathepsins as transcriptional activators? Developmental Cell 2004, 6(5):610–1.
- ↑ Goulet B, Nepveu A (August 2004). "Complete and limited proteolysis in cell cycle progression". Cell Cycle. 3 (8). Georgetown, Tex.: 986–989. PMID 15254406.
- ↑ Michl P, Downward J (January 2006). "CUTL1: a key mediator of TGFbeta-induced tumor invasion". Cell Cycle. 5 (2). Georgetown, Tex.: 132–134. doi:10.4161/cc.5.2.2311. PMID 16357536.
- ↑ Sansregret L, Nepveu A (May 2011). "Gene signatures of genomic instability as prognostic tools for breast cancer". Future Oncology. 7 (5). London, England: 591–594. doi:10.2217/fon.11.34. PMID 21568672.
- ↑ Skalnik DG, Strauss EC, Orkin SH (September 1991). "CCAAT displacement protein as a repressor of the myelomonocytic-specific gp91-phox gene promoter". The Journal of Biological Chemistry. 266 (25): 16736–16744. PMID 1885602.
- 1 2 3 4 5 6 7 8 9 10 Ramdzan ZM, Vadnais C, Pal R, Vandal G, Cadieux C, Leduy L, et al. (March 2014). "RAS transformation requires CUX1-dependent repair of oxidative DNA damage". PLoS Biology. 12 (3) e1001807. doi:10.1371/journal.pbio.1001807. PMC 3949673. PMID 24618719.
- 1 2 3 4 5 6 7 8 Ramdzan ZM, Ginjala V, Pinder JB, Chung D, Donovan CM, Kaur S, et al. (March 2017). "The DNA repair function of CUX1 contributes to radioresistance". Oncotarget. 8 (12): 19021–19038. doi:10.18632/oncotarget.14875. PMC 5386666. PMID 28147323.
- ↑ Harada R, Vadnais C, Sansregret L, Leduy L, Berube G, Robert F, et al. (January 2008). "Genome-wide location analysis and expression studies reveal a role for p110 CUX1 in the activation of DNA replication genes". Nucleic Acids Research. 36 (1): 189–202. doi:10.1093/nar/gkm970. PMC 2248751. PMID 18003658.
- 1 2 Kedinger V, Sansregret L, Harada R, Vadnais C, Cadieux C, Fathers K, et al. (October 2009). "p110 CUX1 homeodomain protein stimulates cell migration and invasion in part through a regulatory cascade culminating in the repression of E-cadherin and occludin". The Journal of Biological Chemistry. 284 (40): 27701–27711. doi:10.1074/jbc.M109.031849. PMC 2785698. PMID 19635798.
- ↑ Sansregret L, Goulet B, Harada R, Wilson B, Leduy L, Bertoglio J, et al. (March 2006). "The p110 isoform of the CDP/Cux transcription factor accelerates entry into S phase". Molecular and Cellular Biology. 26 (6): 2441–2455. doi:10.1128/MCB.26.6.2441-2455.2006. PMC 1430290. PMID 16508018.
- 1 2 3 4 Sansregret L, Vadnais C, Livingstone J, Kwiatkowski N, Awan A, Cadieux C, et al. (February 2011). "Cut homeobox 1 causes chromosomal instability by promoting bipolar division after cytokinesis failure". Proceedings of the National Academy of Sciences of the United States of America. 108 (5): 1949–1954. doi:10.1073/pnas.1008403108. PMC 3033318. PMID 21245318.
- ↑ Vadnais C, Davoudi S, Afshin M, Harada R, Dudley R, Clermont PL, et al. (May 2012). "CUX1 transcription factor is required for optimal ATM/ATR-mediated responses to DNA damage". Nucleic Acids Research. 40 (10): 4483–4495. doi:10.1093/nar/gks041. PMC 3378881. PMID 22319212.
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Further reading
[edit]- Ottolenghi S, Mantovani R, Nicolis S, Ronchi A, Giglioni B (1990). "DNA sequences regulating human globin gene transcription in nondeletional hereditary persistence of fetal hemoglobin". Hemoglobin. 13 (6): 523–541. doi:10.3109/03630268908993104. PMID 2481658.
- Nepveu A (2001). "Role of the multifunctional CDP/Cut/Cux homeodomain transcription factor in regulating differentiation, cell growth and development". Gene. 270 (1–2): 1–15. doi:10.1016/S0378-1119(01)00485-1. PMID 11403998.
- Neufeld EJ, Skalnik DG, Lievens PM, Orkin SH (1993). "Human CCAAT displacement protein is homologous to the Drosophila homeoprotein, cut". Nature Genetics. 1 (1): 50–55. doi:10.1038/ng0492-50. PMID 1301999. S2CID 37107643.
- Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–174. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
- Chernousov MA, Stahl RC, Carey DJ (1996). "Schwann cells secrete a novel collagen-like adhesive protein that binds N-syndecan". The Journal of Biological Chemistry. 271 (23): 13844–13853. doi:10.1074/jbc.271.23.13844. PMID 8662884.
- Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, Suyama A, Sugano S (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–156. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.
- Chattopadhyay S, Whitehurst CE, Chen J (1998). "A nuclear matrix attachment region upstream of the T cell receptor beta gene enhancer binds Cux/CDP and SATB1 and modulates enhancer-dependent reporter gene expression but not endogenous gene expression". The Journal of Biological Chemistry. 273 (45): 29838–29846. doi:10.1074/jbc.273.45.29838. PMID 9792700.
- Rong Zeng W, Soucie E, Sung Moon N, Martin-Soudant N, Bérubé G, Leduy L, et al. (2000). "Exon/intron structure and alternative transcripts of the CUTL1 gene". Gene. 241 (1): 75–85. doi:10.1016/S0378-1119(99)00465-5. PMID 10607901.
- Martin-Soudant N, Drachman JG, Kaushansky K, Nepveu A (2000). "CDP/Cut DNA binding activity is down-modulated in granulocytes, macrophages and erythrocytes but remains elevated in differentiating megakaryocytes". Leukemia. 14 (5): 863–873. doi:10.1038/sj.leu.2401764. PMID 10803519. S2CID 19998783.
- Nirodi C, Hart J, Dhawan P, Moon NS, Nepveu A, Richmond A (2001). "The Role of CDP in the Negative Regulation of CXCL1 Gene Expression". The Journal of Biological Chemistry. 276 (28): 26122–26131. doi:10.1074/jbc.M102872200. PMC 2665279. PMID 11371564.
- Moon NS, Premdas P, Truscott M, Leduy L, Bérubé G, Nepveu A (2001). "S Phase-Specific Proteolytic Cleavage Is Required To Activate Stable DNA Binding by the CDP/Cut Homeodomain Protein". Molecular and Cellular Biology. 21 (18): 6332–6345. doi:10.1128/MCB.21.18.6332-6345.2001. PMC 87367. PMID 11509674.
- Santaguida M, Ding Q, Bérubé G, Truscott M, Whyte P, Nepveu A (2002). "Phosphorylation of the CCAAT displacement protein (CDP)/Cux transcription factor by cyclin A-Cdk1 modulates its DNA binding activity in G(2)". The Journal of Biological Chemistry. 276 (49): 45780–45790. doi:10.1074/jbc.M107978200. PMID 11584018.
- Dintilhac A, Bernués J (2002). "HMGB1 interacts with many apparently unrelated proteins by recognizing short amino acid sequences". The Journal of Biological Chemistry. 277 (9): 7021–7028. doi:10.1074/jbc.M108417200. PMID 11748221. S2CID 39560486.
External links
[edit]- CUTL1+protein,+human at the U.S. National Library of Medicine Medical Subject Headings (MeSH)
- Human CUX1 genome location and CUX1 gene details page in the UCSC Genome Browser.
This article incorporates text from the United States National Library of Medicine, which is in the public domain.