Methanococcus
| Methanococcus | |
|---|---|
Scientific classification  | |
| Domain: | Archaea |
| Kingdom: | Methanobacteriati |
| Phylum: | Methanobacteriota |
| Class: | Methanococci |
| Order: | Methanococcales |
| Family: | Methanococcaceae |
| Genus: | Methanococcus Kluyver and van Niel 1936 |
| Type species | |
| Methanococcus vannielii Stadtman & Barker 1951 | |
| Species | |
| |
Methanococcus is a genus of coccoid methanogens of the family Methanococcaceae.[1] They are all mesophiles, except the thermophilic M. thermolithotrophicus and the hyperthermophilic M. jannaschii. The latter was discovered at the base of a "white smoker" chimney at 21°N on the East Pacific Rise[2] and it was the first archaeal genome to be completely sequenced, revealing many novel and eukaryote-like elements.[3]
Phylogeny
[edit]The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[4] and National Center for Biotechnology Information (NCBI).[1]
| 16S rRNA based LTP_07_2026[5][6][7] | 53 marker proteins based GTDB 11-RS232[8][9][10] | ||||||||||||||||||||||||||||||||||||||||||
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See also
[edit]References
[edit]- 1 2 C.L. Schoch. "Methanococcus". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2026-08-01.
- ↑ W.J. Jones; et al. (December 1983). "Methanococcus jannaschii sp. nov., an extremely thermophilic methanogen from a submarine hydrothermal vent". Arch. Microbiol. 136 (4): 254–261. Bibcode:1983ArMic.136..254J. doi:10.1007/BF00425213. S2CID 33277659.
- ↑ C.J. Bult; et al. (August 1996). "Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii". Science. 273 (5278): 1058–1073. Bibcode:1996Sci...273.1058B. doi:10.1126/science.273.5278.1058. PMID 8688087. S2CID 41481616.
- ↑ Methanococcus in LPSN; Freese, H. M.; Meier-Kolthoff, J. P.; Sardà Carbasse, J.; Afolayan, A. O.; Göker, M. (2026). "TYGS and LPSN in 2025: a Global Core Biodata Resource for genome-based classification and nomenclature of prokaryotes within DSMZ Digital Diversity". Nucleic Acids Research. 54 (D1): D884–D891. doi:10.1093/nar/gkaf1110.
- ↑ "The LTPlus". The All-Species Living Tree Project. Retrieved 1 August 2026.
- ↑ "LTP_all tree in newick format". The All-Species Living Tree Project. Retrieved 1 August 2026.
- ↑ Rossello-Mora, Ramon; Viver, Tomeu; Palmer-Rodríguez, Pere; Westram, Ralf; Bustos-Caparros, Esteban; Gago, Joan Francisco; Gonzalez-Mendez, Jaime; Llabrés, Mercè; Ludwig, Wolfgang; Amann, Rudolf (22 April 2026). "A pipeline for improved 16S rRNA gene-based phylogeny and diversity analyses of Bacteria and Archaea". Nature Portfolio. doi:10.21203/rs.3.rs-9370187/v1.
- ↑ "GTDB release 11-RS232". Genome Taxonomy Database. Retrieved 1 May 2026.
- ↑ "ar53_r232.sp_label". Genome Taxonomy Database. Retrieved 1 May 2026.
- ↑ "Taxon History". Genome Taxonomy Database. Retrieved 1 May 2026.
Further reading
[edit]- Judicial Commission of the International Committee on Systematics of Prokaryotes (2005). "The nomenclatural types of the orders Acholeplasmatales, Halanaerobiales, Halobacteriales, Methanobacteriales, Methanococcales, Methanomicrobiales, Planctomycetales, Prochlorales, Sulfolobales, Thermococcales, Thermoproteales and Verrucomicrobiales are the genera Acholeplasma, Halanaerobium, Halobacterium, Methanobacterium, Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int. J. Syst. Evol. Microbiol. 55 (Pt 1): 517–518. doi:10.1099/ijs.0.63548-0. PMID 15653928.
- Jeanthon C; L'Haridon S; Pradel N; Prieur D (1999). "Rapid identification of hyperthermophilic methanococci isolated from deep-sea hydrothermal vents". Int. J. Syst. Bacteriol. 49 (2): 591–594. doi:10.1099/00207713-49-2-591. PMID 10319480.
- Keswani J; Orkand S; Premachandran U; Mandelco L; et al. (1996). "Phylogeny and taxonomy of mesophilic Methanococcus spp. and comparison of rRNA, DNA hybridization, and phenotypic methods". Int. J. Syst. Bacteriol. 46 (3): 727–735. doi:10.1099/00207713-46-3-727. PMID 8782682.
- Wayne, LG (1986). "Actions of the Judicial Commission of the International Committee on Systematic Bacteriology on requests for opinions published in 1983 and 1984". Int. J. Syst. Bacteriol. 36 (2): 357–358. doi:10.1099/00207713-36-2-357.
- Judicial Commission of the International Committee on Systematics of Prokaryotes (1986). "Transfer of the type species of the genus Methanococcus to the genus Methanosarcina as Methanosarcina mazei (Barker 1936) comb. nov. et emend. Mah and Kuhn 1984 and conservation of the genus Methanococcus (Approved Lists, 1980) emend. Mah and Kuhn 1984 with Methanococcus vannielii (Approved Lists, 1980) as the type species". Int. J. Syst. Bacteriol. 36: 491. doi:10.1099/00207713-36-3-491.
- Mah RA; Kuhn DA (1984). "Transfer of the type species of the genus Methanococcus to the genus Methanosarcina naming it Methanosarcina mazei (Barker 1936) comb. nov. et emend. and conservation of the genus Methanococcus (Approved Lists, 1980) with Methanococcus vannielii (Approved Lists, 1980) as the type species. Request for an opinion". Int. J. Syst. Bacteriol. 34 (2): 263–265. doi:10.1099/00207713-34-2-263.
- Balch WE; Fox GE; Magrum LJ; Woses CR; et al. (1979). "Methanogens: reevaluation of a unique biological group". Microbiol. Rev. 43 (2): 260–296. doi:10.1128/MMBR.43.2.260-296.1979. PMC 281474. PMID 390357.
- Allen, Kylie; Wegener, Gunter; White, Robert (8 August 2014). "Discovery of Multiple Modified F430 Coenzymes in Methanogens and Anaerobic Methanotrophic Archaea Suggests Possible New Roles for F430 in Nature". Applied and Environmental Microbiology. 80 (20): 6403–6412. Bibcode:2014ApEnM..80.6403A. doi:10.1128/AEM.02202-14. PMC 4178637. PMID 25107965.
- Kluyver AJ; van Niel CB (1936). "Prospects for a natural system of classification of bacteria". Zentralbl. Bakterol. Parasitenkd. Infectinskr. Hyg., Abt. II. 94: 369–403.
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