Archaeopteryx (software)
(Redirected from A Tree Viewer)
| Archaeopteryx | |
|---|---|
| Developer | Christian M. Zmasek |
| Stable release | 0.972+ beta 9M
/ 2012.08.08 |
| Operating system | Windows, Linux, Mac OS X |
| Type | Bioinformatics, phylogenomics |
| License | LGPL |
| Website | sites |
| Repository | |
Archaeopteryx is an interactive computer software program, written in Java, for viewing, editing, and analyzing phylogenetic trees. This type of program can be used for a variety of analyses of molecular data sets, but is particularly designed for phylogenomics. Besides tree description formats with limited expressiveness (such as Newick/New Hamphshire, Nexus), it also implements the phyloXML[1] format. Archaeopteryx is the successor to Java program A Tree Viewer (ATV).[2]
References
[edit]- ↑ Han, Mira V.; Zmasek, Christian M. (2009). "phyloXML: XML for evolutionary biology and comparative genomics". BMC Bioinformatics. 10: 356. doi:10.1186/1471-2105-10-356. PMC 2774328. PMID 19860910.
- ↑ Zmasek, Christian M.; Eddy, Sean R. (2001). "ATV: display and manipulation of annotated phylogenetic trees". Bioinformatics. 17 (4): 383–384. doi:10.1093/bioinformatics/17.4.383. PMID 11301314.
External links
[edit]| Fields | |
|---|---|
| Bioinformatics | |
| Structural biology | |
| Research tools | |
| Organizations | |
