CDH9

CDH9
Identifiers
Aliases	CDH9, cadherin 9
External IDs	OMIM: 609974; MGI: 107433; GeneCards: CDH9
Gene location (Human)
Chr.	Chromosome 5 (human)
End	27,121,150 bp
Gene location (Mouse)
Chr.	Chromosome 15 (mouse)
End	16,857,180 bp
RNA expression pattern
	Top expressed in
	endothelial cell; ; prefrontal cortex; ; testicle; ; dorsolateral prefrontal cortex; ; anterior cingulate cortex; ; Brodmann area 9; ; right frontal lobe; ; nucleus accumbens; ; Brodmann area 23; ; middle temporal gyrus;
	Top expressed in
	dentate gyrus of hippocampal formation granule cell; ; supraoptic nucleus; ; lumbar spinal ganglion; ; temporal lobe; ; hippocampus proper; ; anterior amygdaloid area; ; prefrontal cortex; ; barrel cortex; ; subiculum; ; substantia nigra;
	More reference expression data
	n/a
Gene ontology
Molecular function	calcium ion binding; metal ion binding; molecular function; cytoskeletal protein binding; protein homodimerization activity; cadherin binding;
Cellular component	integral component of membrane; plasma membrane; membrane; integral component of postsynaptic membrane; integral component of presynaptic membrane; cell surface; catenin complex;
Biological process	cell adhesion; adherens junction organization; homophilic cell adhesion via plasma membrane adhesion molecules; cell-cell adhesion; synapse assembly; synaptic membrane adhesion; cell-cell junction assembly; calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules; cell-cell adhesion mediated by cadherin; cell morphogenesis;
	Sources:Amigo / QuickGO
Orthologs
Databases	NCBI: entry; OMA: entry
	1007
	12565
	ENSG00000113100
	ENSMUSG00000025370
	Q9ULB4
	P70407
	NM_016279
	NM_009869
	NP_057363
	NP_033999
	Wikidata
View/Edit Human	View/Edit Mouse

Cadherin 9 is a protein that in humans is encoded by the CDH9 gene.^[5]^[6]

Clinical significance

An association with autism has been suggested.^[7]

References

1 2 3 GRCh38: Ensembl release 89: ENSG00000113100 – Ensembl, May 2017
1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000025370 – Ensembl, May 2017
↑ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ "Entrez Gene: cadherin 9".
↑ Suzuki S, Sano K, Tanihara H (April 1991). "Diversity of the cadherin family: evidence for eight new cadherins in nervous tissue". Cell Regulation. 2 (4): 261–70. doi:10.1091/mbc.2.4.261. PMC 361775. PMID 2059658.
↑ Wang K, Zhang H, Ma D, Bucan M, Glessner JT, Abrahams BS, et al. (May 2009). "Common genetic variants on 5p14.1 associate with autism spectrum disorders". Nature. 459 (7246): 528–33. Bibcode:2009Natur.459..528W. doi:10.1038/nature07999. PMC 2943511. PMID 19404256.

External links

Human CDH9 genome location and CDH9 gene details page in the UCSC Genome Browser.

Nollet F, Kools P, van Roy F (June 2000). "Phylogenetic analysis of the cadherin superfamily allows identification of six major subfamilies besides several solitary members". Journal of Molecular Biology. 299 (3): 551–72. doi:10.1006/jmbi.2000.3777. PMID 10835267.
Shimoyama Y, Tsujimoto G, Kitajima M, Natori M (July 2000). "Identification of three human type-II classic cadherins and frequent heterophilic interactions between different subclasses of type-II classic cadherins". The Biochemical Journal. 349 (Pt 1): 159–67. doi:10.1042/0264-6021:3490159. PMC 1221133. PMID 10861224.
Wang K, Zhang H, Bloss CS, Duvvuri V, Kaye W, Schork NJ, Berrettini W, Hakonarson H (September 2011). "A genome-wide association study on common SNPs and rare CNVs in anorexia nervosa". Molecular Psychiatry. 16 (9): 949–59. doi:10.1038/mp.2010.107. PMC 3859494. PMID 21079607.
Kimura K, Wakamatsu A, Suzuki Y, Ota T, Nishikawa T, Yamashita R, Yamamoto J, Sekine M, Tsuritani K, Wakaguri H, Ishii S, Sugiyama T, Saito K, Isono Y, Irie R, Kushida N, Yoneyama T, Otsuka R, Kanda K, Yokoi T, Kondo H, Wagatsuma M, Murakawa K, Ishida S, Ishibashi T, Takahashi-Fujii A, Tanase T, Nagai K, Kikuchi H, Nakai K, Isogai T, Sugano S (January 2006). "Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes". Genome Research. 16 (1): 55–65. doi:10.1101/gr.4039406. PMC 1356129. PMID 16344560.
Ali J, Liao F, Martens E, Muller WA (June 1997). "Vascular endothelial cadherin (VE-cadherin): cloning and role in endothelial cell-cell adhesion". Microcirculation. 4 (2): 267–77. doi:10.3109/10739689709146790. PMID 9219219. S2CID 21501093.
Thedieck C, Kalbacher H, Kuczyk M, Müller GA, Müller CA, Klein G (2007). Zoccali C (ed.). "Cadherin-9 is a novel cell surface marker for the heterogeneous pool of renal fibroblasts". PLOS ONE. 2 (7): e657. Bibcode:2007PLoSO...2..657T. doi:10.1371/journal.pone.0000657. PMC 1924602. PMID 17668045.
Hülsken J, Birchmeier W, Behrens J (December 1994). "E-cadherin and APC compete for the interaction with beta-catenin and the cytoskeleton". The Journal of Cell Biology. 127 (6 Pt 2): 2061–9. doi:10.1083/jcb.127.6.2061. PMC 2120290. PMID 7806582.

This article on a gene on human chromosome 5 is a stub. You can help Wikipedia by adding missing information.

[refGRCh38Ensembl-1] 1 2 3 GRCh38: Ensembl release 89: ENSG00000113100 – Ensembl, May 2017

[refGRCm38Ensembl-2] 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000025370 – Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[entrez-5] "Entrez Gene: cadherin 9".

[pmid2059658-6] Suzuki S, Sano K, Tanihara H (April 1991). "Diversity of the cadherin family: evidence for eight new cadherins in nervous tissue". Cell Regulation. 2 (4): 261–70. doi:10.1091/mbc.2.4.261. PMC 361775. PMID 2059658.

[pmid19404256-7] Wang K, Zhang H, Ma D, Bucan M, Glessner JT, Abrahams BS, et al. (May 2009). "Common genetic variants on 5p14.1 associate with autism spectrum disorders". Nature. 459 (7246): 528–33. Bibcode:2009Natur.459..528W. doi:10.1038/nature07999. PMC 2943511. PMID 19404256.

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CDH9

Clinical significance

See also

References

External links

Further reading